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Khalil Khoury

@khalilkhoury

Message

Genomic bioinformatics analyst driving actionable public-health data systems.

United States

Message

What I'm looking for

I seek roles where I can modernize public-health data systems, lead reproducible genomics analytics, mentor teams, and influence strategic data governance in collaborative, impact-driven organizations.

I am a high-integrity Genomic Bioinformatics Analyst who transforms fragmented genomic, wastewater, and epidemiologic data into actionable intelligence for statewide public-health decision-making. I combine rigorous scientific standards, systems thinking, and practical workflow engineering to deliver reproducible, validated analytics and protect program integrity in politically constrained, multi-stakeholder environments.

I have built end-to-end automated bioinformatics pipelines, operationalized data-governance practices, and produced interactive dashboards and forecasting tools that improved timeliness, completeness, and analytic utility for leadership and partners. I also consult with organizations to modernize data systems, automate workflows, and recover lost revenue while mentoring teams in Python, SQL, and reproducible practices.

Experience

Work history, roles, and key accomplishments

Current

Founder & Data Systems Consultant

Current

KMK Data Consulting

Jan 2025 - Present (1 year 1 month)

Provided data-systems consulting for healthcare clients, designing automated API integrations and reconciliation logic that eliminated manual workflows and recovered approximately $20,000/month in lost revenue for a pediatric practice.

API Integration Automation Python Workflow Design ETL

Current

Genomic Bioinformatics Analyst

Current

Arizona Department of Health Services

Dec 2021 - Present (4 years 2 months)

Led design and implementation of statewide genomic and wastewater surveillance pipelines and data-governance practices, reducing reliance on external consultants and enabling actionable public-health decisioning; evaluated multi-million-dollar proposals to protect state resources and delivered automation that produced an estimated $1.5M+ annual savings.

Pathogen Genomics Python R SQL AWS SnakeMake Nextflow Data Governance

Graduate Researcher

Barrow Neurological Institute

May 2020 - May 2021 (1 year)

Conducted computational neuroscience research on neural signal processing and brain–computer interfaces, developing data-analysis pipelines and mathematical models for high-dimensional electrophysiological and imaging data.

Signal Processing Data Analysis Electro Physiology Modeling

Education

Degrees, certifications, and relevant coursework

Arizona State University

Master of Science in Engineering, Biomedical Engineering

Completed a Master of Science in Engineering in Biomedical Engineering, focusing on computational and applied bioengineering methods relevant to public-health surveillance.

Arizona State University

Bachelor of Science in Engineering, Biomedical Engineering

Earned a Bachelor of Science in Engineering in Biomedical Engineering with coursework and research supporting neural engineering and data-analysis pipeline development.