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Rahul Selvaraj

@rahulselvaraj

Bioinformatics Analyst using scalable genomics pipelines to deliver regulatory-grade, audit-ready insights.

United States
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What I'm looking for

I’m looking to lead regulated bioinformatics work—building reproducible RNA-Seq/WES pipelines, optimizing HPC/AWS throughput, and delivering submission-ready biomarker and patient stratification insights with GLP/GxP and FDA audit readiness.

I’m a Bioinformatics Analyst with 5+ years delivering scalable genomics analytics and regulatory-grade computational workflows across oncology and immunology programs. I design end-to-end RNA-Seq and whole-exome sequencing pipelines, supporting IND and NDA submission documentation through rigorous, traceable methods.

I architect and optimize HPC and AWS-based parallel processing frameworks to improve analytical turnaround time and computational efficiency for regulated GxP environments. Using Python and R, I build reproducible pipelines for quality control, alignment, variant calling, and functional annotation, ensuring data integrity and audit readiness.

I strengthen biomarker discovery and patient stratification by applying survival modeling, multivariate regression, and pathway enrichment analyses across terabyte-scale, multi-omics datasets. I also leverage version-controlled, containerized, fully traceable workflows aligned with GLP standards to help teams produce statistically defensible, submission-ready results.

Experience

Work history, roles, and key accomplishments

ZI
Current

Bioinformatics Analyst

Zifo

May 2025 - Present (1 year 1 month)

Led end-to-end RNA-Seq, whole-exome sequencing, and variant analysis using reproducible, regulatory-grade workflows for GLP/GxP environments. Built HPC/AWS-optimized pipelines and automated QC, alignment, variant calling, and annotation, and delivered submission-ready analytical reporting with audit-traceable data lineage.

SA

Bioinformatics Analyst

Sanofi

Apr 2019 - Jun 2023 (4 years 2 months)

Delivered end-to-end NGS pipelines for oncology and immunology programs, integrating QC, alignment, variant calling, CNV analysis, and functional annotation. Produced differential expression, pathway enrichment, survival modeling, and multi-omics biomarker analyses to support IND/NDA submission-ready documentation and regulatory collaboration.

Education

Degrees, certifications, and relevant coursework

Northeastern University logoNU

Northeastern University

Master of Science, Bioinformatics

Earned a Master of Science in Bioinformatics at Northeastern University, graduating in December 2025.

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