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Thabo Semenya

@thabosemenya

Bioinformatician specializing in bacterial genomics, NGS analysis, and pipeline development.

South Africa
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What I'm looking for

I seek a research or industry role focused on bacterial genomics and NGS where I can build reproducible pipelines, mentor teams, and translate genomic data into actionable results.

I am an analytical, research-driven bioinformatician with an MSc in Cell & Computational Biology and a specialization in bacterial genomics. I combine a strong molecular-biology foundation with advanced computational skills to turn sequencing data into actionable insights.

Over four years I have led whole genome sequencing and metagenomics projects, developing and optimizing reproducible Nextflow pipelines used across my research workflows. I am proficient in Python and experienced with Illumina, ONT, and PacBio sequencing platforms.

My work emphasizes data quality, rigorous protocols, and clear scientific communication; I have managed complex datasets, ensured compliance in research settings, and contributed to collaborative projects. I also bring teaching and community engagement experience from university assistantships and volunteer roles.

I pursue continual professional development in data science, clinical research data management, and bioinformatics, and I am committed to delivering robust computational solutions that advance bacterial genomics research.

Experience

Work history, roles, and key accomplishments

Education

Degrees, certifications, and relevant coursework

University of Cape Town logoUT

University of Cape Town

Master of Science, Cell and Computational Biology (Bioinformatics and Bacterial Genomics)

2025 - 2025

Activities and societies: Research assistant focusing on bacterial genomics, whole genome sequencing, Nextflow pipeline development, and NGS data analysis.

Completed MSc in Cell & Computational Biology with specialization in Bioinformatics and Bacterial Genomics.

University of Limpopo logoUL

University of Limpopo

Bachelor of Science (Honours) in Medical Sciences, Human Genetics, Bioinformatics and Research

2020 - 2020

Activities and societies: Teaching assistant in Aquaculture; tutored Mathematics and Physical Sciences; managed student research data.

Completed BSc Medical Sciences (Hons) with specialization in Human Genetics, Bioinformatics and Research.

Tech stack

Software and tools used professionally

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Thabo Semenya - Volunteer Research Coordinator - ProjectX | Himalayas