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Aditya Naman Soni

@adityanamansoni

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Bioinformatician with a passion for genomics, transcriptomics and epigenetics

India

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What I'm looking for

Seeking a challenging role in a research-oriented organization where I can apply my bioinformatics skills to contribute to groundbreaking discoveries and advancements in the field of genomics and transcriptomics.

As a bioinformatician, I have a strong background in genomics, transcriptomics, and proteomics. My expertise lies in analyzing and interpreting large-scale biological data using various bioinformatics tools and programming languages such as Python, R, and Bash. I have experience in working with high-throughput sequencing data, including RNA-seq, ChIP-seq, and genomic data.

My research experience includes identifying differentially expressed genes, performing functional annotation and enrichment analysis, and creating scripts for data processing and analysis. I have also worked on projects involving molecular docking and pharmacodynamic studies.

I am proficient in using various bioinformatics tools and databases, including DESeq2, STAR, Salmon, featureCounts, GSEA, clusterProfiler, KEGG, STRING, NCBI, ENSEMBL, and GTEx. I am also skilled in statistical analysis and data visualization using tools such as PCA, Surrogate Variable Analysis, Correlation, Linear Regression, Logistic Regression, and ggplot2.

Experience

Work history, roles, and key accomplishments

Current

Project Associate

Current

CSIR-Centre for Cellular & Molecular Biology

Jul 2023 - Jun 2024 (11 months)

Worked on a project investigating transcriptional changes in children born to micronutrient-intervened mothers. Identified differentially expressed genes and enriched biological processes using DESeq and GSEA tools. Analyzed genotype and gene expression associations using MatrixQTL and PLINK.

Project Trainee

Centre for DNA Fingerprinting and Diagnosis

Jan 2023 - Apr 2024 (1 year 3 months)

Conducted a genome-wide identification and characterization of NLR proteins in Panicum Miliaceum. Performed sequence similarity analysis and domain classification, revealing patterns among different classes of genes.

NBS LRR Genes Analysis Classification

Academic Project

Bharati Vidyapeeth Deemed to be University

Jan 2022 - Jan 2023 (1 year)

Performed molecular docking and pharmacodynamic studies to identify potential inhibitors of GbpC formation by Streptococcus mutans. Analyzed ligand-protein interactions and prepared a manuscript for publication.

Docking Manuscripts

Intern

Interactive Research School for Health Affairs

Jul 2022 - Aug 2022 (1 month)

Conducted a 28-day subacute oral toxicity study of Cisplatin in mice. Evaluated effects across different doses and monitored body weights, food consumption, and conducted biochemical assessments.

Monitoring