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@adityanamansoni
Bioinformatician with a passion for genomics, transcriptomics and epigenetics
As a bioinformatician, I have a strong background in genomics, transcriptomics, and proteomics. My expertise lies in analyzing and interpreting large-scale biological data using various bioinformatics tools and programming languages such as Python, R, and Bash. I have experience in working with high-throughput sequencing data, including RNA-seq, ChIP-seq, and genomic data.
My research experience includes identifying differentially expressed genes, performing functional annotation and enrichment analysis, and creating scripts for data processing and analysis. I have also worked on projects involving molecular docking and pharmacodynamic studies.
I am proficient in using various bioinformatics tools and databases, including DESeq2, STAR, Salmon, featureCounts, GSEA, clusterProfiler, KEGG, STRING, NCBI, ENSEMBL, and GTEx. I am also skilled in statistical analysis and data visualization using tools such as PCA, Surrogate Variable Analysis, Correlation, Linear Regression, Logistic Regression, and ggplot2.
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Work history, roles, and key accomplishments
CSIR-Centre for Cellular & Molecular Biology
Jul 2023 - Jun 2024 (11 months)
Worked on a project investigating transcriptional changes in children born to micronutrient-intervened mothers. Identified differentially expressed genes and enriched biological processes using DESeq and GSEA tools. Analyzed genotype and gene expression associations using MatrixQTL and PLINK.
Centre for DNA Fingerprinting and Diagnosis
Jan 2023 - Apr 2024 (1 year 3 months)
Conducted a genome-wide identification and characterization of NLR proteins in Panicum Miliaceum. Performed sequence similarity analysis and domain classification, revealing patterns among different classes of genes.
Bharati Vidyapeeth Deemed to be University
Jan 2022 - Jan 2023 (1 year)
Performed molecular docking and pharmacodynamic studies to identify potential inhibitors of GbpC formation by Streptococcus mutans. Analyzed ligand-protein interactions and prepared a manuscript for publication.
Interactive Research School for Health Affairs
Jul 2022 - Aug 2022 (1 month)
Conducted a 28-day subacute oral toxicity study of Cisplatin in mice. Evaluated effects across different doses and monitored body weights, food consumption, and conducted biochemical assessments.
Degrees, certifications, and relevant coursework
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