Open to opportunities

Saman Israr

@samanisrar

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Bioinformatician specializing in molecular simulations, reproducible pipelines, and protein structure analysis.

India

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What I'm looking for

I seek roles where I can build reproducible computational pipelines, apply MD and ML to biological problems, and lead collaborative research teams.

I am a bioinformatician with hands-on experience in molecular dynamics, protein structure analysis, and reproducible pipeline engineering. I have built Snakemake-based MD pipelines, created a TRJ Bank for trajectory analysis, and prototyped PDB preprocessing strategies to reduce preparation errors and accelerate multi-protein workflows.

I have applied machine learning and cheminformatics to drug-discovery projects, producing high-performance QSAR models and docking validations, and reanalyzed single-cell RNA-seq data to extract immune signatures. I deliver robust, documented computational solutions for research and clinical environments and prioritize reproducibility, automation, and measurable improvements in efficiency and accuracy.

Experience

Work history, roles, and key accomplishments

Current

Bioinformatics Team Lead

Current

U LLC

Jul 2025 - Present (6 months)

Led development of Snakemake-based modular MD simulation pipelines and deployed TRJ Bank for trajectory analysis, cutting manual workflows by over 70% and completing 50% of phase-one milestones.

SnakeMake GROMACS PyRosetta R

Research Analyst

U LLC

May 2025 - Jul 2025 (2 months)

Developed protein structure analysis pipelines processing 50+ PDBs and improved MD motif detection accuracy by 20% using GROMACS and entropy analyses.

GROMACS Pdb Python R Docking

Clinical Operations Intern

Yatharth Multi-specialty Hospital & PMM Hospital

Jul 2022 - Jun 2023 (11 months)

Developed standardized surgical data templates for 200+ procedures and optimized operating theatre setups, reducing errors and setup time by 25% each.

Clinical Operations Process Optimization & QA Efficiency Improvement Documentation

Education

Degrees, certifications, and relevant coursework

Jamia Hamdard

Master of Science, Computational Biology, Systems Biology, and Bioinformatics

2023 - 2025

Grade: 8.62/10 CGPA

Completed a Master of Science in Computational Biology, Systems Biology, and Bioinformatics with coursework and thesis work focused on AI-assisted drug discovery and single-cell RNA-seq analysis.

Jamia Hamdard

Bachelor of Science, Anesthesia and Operation Theatre Techniques

2019 - 2022

Grade: 8.24/10 CGPA

Earned a Bachelor of Science in Anesthesia and Operation Theatre Techniques with practical training relevant to clinical operations and healthcare workflow optimization.