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BenchSciBE

Software Engineer, Data – Query Intelligence & Infrastructure - 6 Month Contract

We’re resolving the complexity of disease biology to help advance your science.

BenchSci

Employee count: 51-200

United Kingdom only
We are looking for a Software Engineer, Data to be at the heart of designing systems that understand user intent by leveraging knowledge graphs and Model Context Protocol to deliver Generative AI products. Your work will involve API development, performance optimization, and maintaining high-performance access to large, interconnected datasets.
In this role, you'll blend machine learning and data engineering expertise to build scalable systems, improve query efficiency, and contribute to production-grade solutions that are deeply context-aware.

You will:

  • Design, implement, and own the Model Context Protocol, ensuring our GenAI systems receive rich, stateful information for advanced query interpretation.
  • Build and leverage knowledge graphs to model complex data relationships, enhancing the depth and accuracy of our query understanding capabilities.
  • Develop and maintain robust data pipelines that populate our graph databases and support efficient, real-time query analysis.
  • Develop and refine APIs that provide fast, reliable access to processed data and insights derived from our graphs and ML models.
  • Establish, monitor, and improve query performance benchmarks against large-scale graph and tabular datasets.
  • Contribute to query interpretation and NLP-driven analysis, applying ML techniques to improve system intelligence.
  • Design and implement scalable, testable solutions using modern frameworks and tools.
  • Collaborate with colleagues on the design and delivery of data-intensive ML systems that are fundamentally graph and context aware.
  • Share knowledge and learn from others to continuously raise the technical bar.

You Have:

  • PhD or advanced degree in Computer Science, Software Engineering, or a related field.
  • A strong background in machine learning, NLP, query analysis, and data science applications.
  • Experience with graph technologies, including graph databases (e.g., Neo4j, Neptune) and/or graph processing frameworks (e.g., NetworkX).
  • Experience designing or working with systems that manage state or context for GenAI models; direct experience with a Model Context Protocol is a significant plus.
  • Hands-on experience in Python
  • Proficiency in query languages (e.g., SQL, Cypher, Gremlin) and optimizing queries over large, complex datasets.
  • Experience building or supporting ETL pipelines, APIs, or real-time/batch query systems.
  • Familiarity with cloud environments (GCP preferred), CI/CD pipelines, Docker, and GitHub Actions.
  • A strong understanding of performance optimization.
  • The ability to clearly communicate technical concepts to both technical and non-technical audiences.
  • A collaborative mindset and a growth mindset, staying up to date with advances in ML, graph systems, and data engineering.
About BenchSci:
BenchSci's mission is to exponentially increase the speed and quality of life-saving research and development. We empower scientists to run more successful experiments with the world's most advanced, biomedical artificial intelligence software platform.
Backed by Generation Investment Management, TCV, Inovia, F-Prime, Golden Ventures, and Google's AI fund, Gradient Ventures, we provide an indispensable tool for scientists that accelerates research at top pharmaceutical companies and leading academic centers.
Our Culture:
Our culture fosters transparency, collaboration, and continuous learning.
We value each other's differences and always look for opportunities to embed equity into the fabric of our work. We foster diversity, autonomy, and personal growth, and provide resources to support motivated self-leaders in continuous improvement.
You will work with high-impact, highly skilled, and intelligent experts motivated to drive impact and fulfill a meaningful mission. We empower you to unleash your full potential, do your best work, and thrive. Here you will be challenged to stretch yourself to achieve the seemingly impossible.
Diversity, Equity and Inclusion: We're committed to creating an inclusive environment where people from all backgrounds can thrive. We believe that improving diversity, equity and inclusion is our collective responsibility, and this belief guides our DEI journey. Learn more about our DEI initiatives.
Accessibility Accommodations: Should you require any accommodation, we will work with you to meet your needs. Please reach out to talent@benchsci.com.

About the job

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Job type

Contractor

Experience level

Mid-level

Location requirements

Hiring timezones

United Kingdom +/- 0 hours

About BenchSci

Learn more about BenchSci and their company culture.

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We’re resolving the complexity of disease biology to help advance your science.

Using AI and proprietary visual machine learning, we’ve built the world’s first evidence-backed map of disease biology. Because we believe that when scientists understand what has already been done, they can understand the feasibility of what is yet to be discovered.

We taught a computer to read and understand experiments like a biologist

Our founders Tom Leung, David Q. Chen, Elvis Wianda, and Liran Belenzon met at the U of T Creative Destruction Lab in 2015. Together they built, tested, and validated an AI solution to the antibody reproducibility crisis. This captured the attention of Google’s AI fund Gradient Ventures, who led BenchSci’s A-round and raised $10M to develop the technology and the business.

Then built an enterprise AI solution to antibody selection

In 2017, BenchSci launched its first application, AI-Assisted Antibody Selection, to help scientists reduce experimental failure. The solution used both experiment-specific text ML and proprietary vision ML models that could understand the type of experiment being conducted. Next, our team then built relationships between those data points with proprietary bioinformatics ontologies. Best of all, we made these results searchable in an intuitive user interface.

Now we power research at the world’s biggest institutions

Within three years, more than 4,300 leading academic research institutions and 16 of the top 20 pharma companies were using our AI solutions. More than 50,000 scientists began relying on BenchSci to support their experiment decisions.

Project Butterfly—The world’s first evidence-backed map of disease biology

What scientists discovered was that BenchSci and our visual ML had built the first objective map of the underlying biology of disease. So, working in secret with top partners and global pharma R&D leaders, we launched Project Butterfly—an attempt to use this transformative technology to solve the biggest challenges in pre-clinical research. iNovia and TCV supported this initiative with a $50M Series C round.

Our next step: ASCEND

The portfolio success platform developed during Project Butterfly was given the name ASCEND, as it is designed to take the discovery and development of medicine to new heights. It augments scientists by giving them an unmatched understanding of disease biology in a platform that democratizes that understanding in all therapeutic areas. With ASCEND, our aim is to increase the speed and yield of the R&D portfolio by multiples, not percentages.

Series D Funding

BenchSci announces the completion of its Series D funding round led by Generation Investment Management. The significant investment enables BenchSci to further enhance the AI-powered platform ASCEND, expand offerings, and continue to empower scientists with the tools they need to accelerate drug discovery and improve patient outcomes.

Employee benefits

Learn about the employee benefits and perks provided at BenchSci.

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Home Office Budget

BenchSci supports remote work with a $1000 CAD budget for employees to set up their home office.

Learning & Development

BenchSci invests in its employees' growth with a $2000 CAD annual budget for learning and development.

Unlimited Flex Time

Employees at BenchSci enjoy unlimited flex time, sick days, personal days, and time off for religious holidays.

Parental Leave Top-Up

BenchSci offers generous parental leave benefits with a top-up plan and paid time options to support new parents.

View BenchSci's employee benefits
Claim this profileBenchSci logoBE

BenchSci

Company size

51-200 employees

Founded in

2015

Chief executive officer

Liran Belenzon

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BenchSci hiring Software Engineer, Data – Query Intelligence & Infrastructure - 6 Month Contract • Remote (Work from Home) | Himalayas