Open to opportunities

Ziqi Kang

@ziqikang

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PhD candidate specializing in bioinformatics and spatial tumor biology.

Finland

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What I'm looking for

I seek a collaborative environment where I can apply my bioinformatics skills to impactful cancer research.

I am currently pursuing a PhD at the University of Helsinki, focusing on bioinformatics and spatial tumor biology. My academic journey has equipped me with a robust foundation in biological sciences, culminating in a Master of Science in Bioinformatics from Uppsala University. My research experience spans various prestigious institutions, where I have developed computational methods to analyze complex biological data.

During my time as a Research Assistant at the Karolinska Institute and SciLifeLab, I contributed to innovative projects that aimed to identify cellular architectures in cancer research. My work on the NIPMAP project, which involved advanced imaging techniques, has been published and recognized in the scientific community. I am passionate about leveraging my skills in programming and data analysis to drive impactful research in cancer biology.

Experience

Work history, roles, and key accomplishments

Current

Board Member

Current

CytoData Society

Jan 2024 - Present (1 year 5 months)

Participated in planning the CytoData 2024 Symposium, collaborating with SIB2 to promote image-based profiling of biological phenotypes.

Collaboration

Research Assistant in Spatial Tumor Biology

Karolinska Institute & SciLifeLab

Jun 2022 - Mar 2023 (9 months)

Contributed to developing computational methods for analyzing cancer datasets, focusing on cellular architecture and immune escape strategies using single-cell and spatial transcriptomics.

R Python Git ScRNA Seq Fluorescence Imaging Linux

MSc Project

Karolinska Institute & SciLifeLab

Nov 2021 - Jun 2022 (7 months)

Developed a cell type identification method based on hyperplexed immunofluorescence imaging data, analyzing tumor microenvironmental niches and comparing tumor architecture across treatment groups.

R Python Fluorescence Imaging Git ScRNA Seq Hyperplexed Imaging

International Student Ambassador

Uppsala University

Jan 2021 - Jan 2022 (1 year)

Managed social media operations and provided guidance to international students, enhancing their integration and experience at the university.

Summer Research

Uppsala University, Dept. of Immunology, Genetics and Pathol

Jun 2021 - Aug 2021 (2 months)

Analyzed ATAC-seq datasets from Heparanase knockout mouse embryonic fibroblasts to explore genome expression and strategies related to invasive cancer phenotypes.

R Python Git Linux

Education

Degrees, certifications, and relevant coursework

University of Helsinki

PhD, Bioinformatics

2023 -

Currently pursuing a PhD, focusing on advanced research methodologies and applications in the field of bioinformatics.

Sun Yat-sen University

Bachelor of Science, Biological Science

2016 - 2022

Earned a Bachelor of Science in Biological Science, gaining foundational knowledge in biological concepts and research techniques.

Uppsala University

Master of Science, Bioinformatics

2020 - 2022

Completed a Master of Science in Bioinformatics, where I engaged in various research projects and developed computational methods for biological data analysis.