İrem Nur Eş

Provided bioinformatics consulting and analytical support for international research clients across genomics, NGS, RNA-seq, and biomedical data science. Developed reproducible analytical workflows and automated pipelines using Python and R.

Led large-scale re-analysis and high-resolution cell-type annotation of single-cell transcriptomic datasets, including metabolic pathway investigation. Developed donor-level Linear Mixed-Effects Models in R using lme4.

Designed a full-scale lignocellulosic bioethanol biorefinery and conducted mass, heat, and energy balances. Modeled biochemical reaction systems and bioreactor fermentation kinetics using Aspen and AutoCAD P&ID.

Performed bioinformatics quality assessment and preparation of mitochondrial COI sequence data for GenBank submission. Reviewed sequence integrity, annotation requirements, and submission-ready formatting.

Developed an automated Python/Biopython pipeline for parsing, processing, and analyzing large-scale genomic sequence data. Implemented structured data extraction, quality checks, and reproducible processing steps.

Generated publication-quality volcano plots and evaluated differential gene expression results for biomedical research. Produced clear, publication-ready figures from gene-level statistical outputs.

Conducted scientific literature research for biomedical projects involving ocular drug-delivery systems. Developed scientific illustrations and technical diagrams for complex biological mechanisms.

Led development of a multimodal AI-enabled wearable system for real-time bruxism detection. Integrated EMG biosensor data, physiological signal processing, and computational data pipelines.

Built a reproducible clinical data quality-control workflow covering metadata cleaning, outlier assessment, missing-data handling, and consistency checks. Generated interactive HTML dashboards for exploratory analysis.

Participated in research investigating genetic characteristics of algae, contributing to experimental design and genetics-focused research workflows.

Participated in plant genetics research involving genome analysis, genetic marker identification, and PCR-based molecular biology workflows.

Pursuing a B.Sc. in Genetics and Bioengineering with a focus on bioinformatics, computational biology, molecular genetics, bioprocess engineering, and applied statistics.