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Qicheng Ma

@qichengma

Bioinformatics Research Scientist II at Alexion Pharmaceutical / Astrazeneca who developed an automated drug-target identification pipeline.

United States
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At Alexion Pharmaceutical / Astrazeneca, I worked as a Bioinformatics Research Scientist II through October 2026. I developed an automated target-identification pipeline that takes data from public sources through AI-ready formats and combines network and pathway information to identify novel drug targets.

At Takeda Pharmaceutical Company Limited, I developed vector integration site analysis pipelines for collaborations with Ensoma and Poseida. I also developed pipelines to predict off-target effects for mutant HTT gene zinc-finger work.

At Novartis Institutes for Biomedical Research, I developed a copy-number analysis tool for SNP array data and applied it to CCLE datasets, receiving the 2010 team award. I also developed NGS analysis tools for CRISPR off-target sites and complex on-target changes.

My work has spanned bioinformatics, machine learning, and statistics in pharmaceutical research. I’ve contributed to published research on topics including mosquito small-RNA genomics and transcriptional regulation, and my sequence-analysis work resulted in a Novartis patent.

Experience

Work history, roles, and key accomplishments

BM

Bioinformatics Staff Scientist

Boston University School of Medicine

Nov 2017 - Aug 2020 (2 years 9 months)

Applied bioinformatics expertise to support research projects, including NGS data analysis and pipeline development.

Education

Degrees, certifications, and relevant coursework

MU

Montclair State University

Certificate of Completion, Biology

Completed an undergraduate biology course, 'The World of the Cell', at Montclair State University in 2002.

NT

New Jersey Institute of Technology

Ph.D., Computer Science

Ph.D. in Computer Science with a focus on Computational Biology from New Jersey Institute of Technology, completed in 2000.

BT

Beijing Research Institute of Simulation Technology

Master of Science, Computer Science and Engineering

Master of Science in Computer Science and Engineering from Beijing Research Institute of Simulation Technology, completed in 1995.

BU

Beihang University

Bachelor of Science, Computer Science

Bachelor of Science in Computer Science from Beihang University, completed in 1992.

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