Naeimeh Hosseini
@naeimehhosseini
PhD candidate and computational bioengineer specializing in spatial multi-omics analysis.
What I'm looking for
I am a PhD candidate and computational bioengineer with a strong foundation in mechanical engineering and computational science, combining engineering, biomedicine, and computer science to advance biomedical research.
I have led computational workflows for spatial multi-omics data integration, modeled complex fluid–biostructure interactions, and developed high-performance simulation tools, contributing to research at Helmholtz Munich and Technical University of Munich.
I am skilled in C++, Python, high-performance computing, numerical modelling, and machine learning, and I seek opportunities to apply these strengths to interdisciplinary projects that push biomedical innovation.
Experience
Work history, roles, and key accomplishments
PhD Candidate
Helmholtz Munich
Jun 2022 - Present (3 years 4 months)
Developing computational workflows for spatial multi-omics data analysis, integrating spatial transcriptomics with metabolomics/lipidomics to enable high-resolution biological insights.
Scientific Researcher
Technical University of Munich
Apr 2017 - Mar 2021 (3 years 11 months)
Modeled and simulated interactions between complex fluids and bio-structures for the EU NANOSHOCK project, advancing understanding of manufacturing shock interactions at the nanoscale.
Research Assistant
Technical University of Munich
Jun 2016 - Mar 2017 (9 months)
Developed code and features for the DEAL.II finite element library supporting plasma physics applications and numerical methods research.
Research Assistant
Technical University of Munich
Apr 2015 - Mar 2016 (11 months)
Simulated blood flow and monitored blood pressure for medical procedure research, contributing to computational models and validation of clinical measurements.
Research Assistant
Technical University of Munich
Oct 2014 - Mar 2015 (5 months)
Calibrated 3D ultrasound systems and supported imaging research to improve measurement accuracy and experimental reproducibility.
Education
Degrees, certifications, and relevant coursework
Helmholtz Munich / Technical University of Munich
PhD Candidate, Bioengineering / Computational Biology
2023 -
PhD candidate conducting research in bioengineering and spatial multi-omics data analysis, integrating spatial transcriptomics and metabolomics/lipidomics.
Technical University of Munich
Master of Science, Computational Science & Engineering
2014 - 2017
Grade: GPA 1.4 (German grading system)
Completed a Master of Science in Computational Science & Engineering with a thesis developing a computational finite element model exploring anisotropy in extracellular matrices.
University of Tehran
Bachelor of Science, Mechanical Engineering
2008 - 2013
Grade: GPA 2.0 (German grading system)
Completed a Bachelor of Science in Mechanical Engineering; thesis on conceptual design of an ultrasound-activated piezoelectric micro-generator for implanted MEMS devices.
Tech stack
Software and tools used professionally
Availability
Location
Authorized to work in
Job categories
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