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Agustín BertoneAB
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Agustín Bertone

@agustnbertone

I build end-to-end metagenomics pipelines to characterize environmental microbial communities.

Argentina
Message

What I'm looking for

I'm looking for a remote-ready, digital-first role where I can build reproducible bioinformatics workflows, analyze complex biological datasets, and continue growing across computational biology and microbial ecology.

At INGEBI–CONICET, I independently designed and executed an end-to-end metagenomics pipeline for 20 environmental samples, from raw sequencing data through functional and taxonomic annotation.

I use MEGAHIT, MetaBAT2, CheckM, Bowtie2, Anvi'o, and Kraken2 to generate high-quality bacterial genome bins and investigate microbial communities’ metabolic potential. My undergraduate thesis and a manuscript in preparation build on this work, where I will be a co-author.

At UNSAM’s Institute for Biotechnological Research, I combined computational work with microbial cultivation, strain handling, protein extraction and purification, and SDS-PAGE. I systematically tested experimental variables and validated protocol changes against concrete evidence.

I'm completing a Biotechnology degree and work comfortably in independent, asynchronous, remote-first environments. I bring rigorous quality criteria, reproducible workflows, and clear communication of technical findings to broad audiences.

Experience

Work history, roles, and key accomplishments

IC
Current

Research Intern - Bioinformatics

INGBIE - CONICET

Jan 2024 - Present (2 years 7 months)

Independently designed and executed a full metagenomics bioinformatics pipeline, processing 20 environmental samples and generating 10-50 high-quality bacterial genome bins per sample. Characterized functional metabolic potential of bacterial communities and communicated findings to non-specialist audiences.

IU

Research Intern - Microbiology & Protein Biochemistry

Institute for Biotechnological Research (IIB) - UNSAM

Aug 2024 - Dec 2024 (4 months)

Selected through a competitive university research grant. Conducted microbial cultivation, strain handling, protein extraction and purification, and verification via SDS-PAGE. Systematically tested experimental variables to optimize protocol efficiency.

Education

Degrees, certifications, and relevant coursework

Universidad Nacional de San Martín logoUM

Universidad Nacional de San Martín

Bachelor's Degree, Biotechnology

Grade: 8.07/10

Activities and societies: Elected student representative, School of Biotechnology & Nanotechnology (UNSAM).

Pursuing a Bachelor's Degree in Biotechnology with a GPA of 8.07/10, currently in the final stage of coursework and thesis.

Tech stack

Software and tools used professionally

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