Senior System Software Engineer - Genomics HPC (Remote - US)

This position is posted by Jobgether on behalf of a partner company. We are currently looking for a Senior System Software Engineer – Genomics HPC in the United States.

In this role, you will be at the forefront of developing high-performance computing solutions for genomics and bioinformatics applications. You will work closely with cross-functional teams to design, optimize, and deploy software that accelerates computational biology research on GPU architectures. The role offers the chance to tackle complex algorithmic challenges, drive innovation in bioinformatics software, and collaborate with industry and academic partners worldwide. You will focus on enhancing system performance, implementing advanced algorithms, and ensuring scalable, production-ready solutions. This position provides a dynamic environment for those passionate about applying HPC and AI technologies to real-world healthcare problems.

Accountabilities:

• Develop, implement, and optimize HPC software for genomics and bioinformatics applications.
• Analyze and tune performance on current and next-generation GPU architectures.
• Collaborate with industry and academic partners to understand computational challenges and deliver HPC solutions.
• Work closely with hardware, CUDA, and AI research teams to apply novel technologies to genomic analysis.
• Design and implement sophisticated algorithms and data structures to solve complex computational problems.
• Break down large problems into modular, independent components for scalable development.
• Contribute to productizing HPC software and delivering robust, production-ready solutions.

Requirements

• Bachelor’s or Master’s degree in Computer Science, related technical field, or equivalent experience.
• 5+ years of experience in system software engineering, HPC, or related fields.
• Strong proficiency in C/C++, CUDA, and software design principles.
• Experience with GPU programming, debugging, and performance optimization.
• Solid understanding of parallel programming, concurrency control, memory management, and scalability.
• Knowledge of computer system architecture and operating systems.
• Experience designing and implementing complex algorithms and data structures.
• Strong collaboration, communication, and problem-solving skills in technical environments.

Ways to stand out:

• Hands-on experience with LLMs, Graph Neural Networks, or Graph Transformer Networks applied to genomics.
• Ability to break complex problems into modular, independent tasks.
• Strong interpersonal skills for guiding and influencing teams across technical domains.

Benefits

• Competitive base salary: $148,000 – $287,500 (depending on level and experience).
• Eligibility for equity and performance-based incentives.
• Comprehensive healthcare coverage, including medical, dental, and vision.
• Flexible work arrangements with remote and on-site opportunities.
• Paid time off, holidays, and professional development programs.
• Inclusive, collaborative, and innovative work environment.

Jobgether is a Talent Matching Platform that partners with companies worldwide to efficiently connect top talent with the right opportunities through AI-driven job matching.

When you apply, your profile goes through our AI-powered screening process designed to identify top talent efficiently and fairly.
🔍 Our AI evaluates your CV and LinkedIn profile thoroughly, analyzing your skills, experience, and achievements.
📊 It compares your profile to the job’s core requirements and past success factors to determine your match score.
🎯 Based on this analysis, we automatically shortlist the 3 candidates with the highest match to the role.
🧠 When necessary, our human team may perform an additional manual review to ensure no strong profile is missed.

The process is transparent, skills-based, and free of bias — focusing solely on your fit for the role. Once the shortlist is completed, we share it directly with the company that owns the job opening. The final decision and next steps (such as interviews or additional assessments) are handled by their internal hiring team.

Thank you for your interest!